Insertion junction: CLIP2.008904_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008904
Chromosome:chromosome 16
Location:5277241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684000 (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGTGGCTGGTGGTGTCGGTGGTGCGGGAGGCGCGCGGGCAGGCCGA
Internal bar code:CGCATTTTACTTTTGAACCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2704
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCTTCCTGAGGTCGT
Suggested primer 2:GATATGGTGCAGGAGGAGGC