Insertion junction: CLIP2.008904_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008904
Chromosome:chromosome 16
Location:5277241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684000 (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGGTCATTCCGCCGCAGCCTCAGCACCGCCTCCCCTCCCGCAGCCC
Internal bar code:CGCATTTTACTTTTGAACCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATATGGTGCAGGAGGAGGC
Suggested primer 2:CAACAGCTTCCTGAGGTCGT