Insertion junction: CLIP2.008914_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008914
Chromosome:chromosome 13
Location:4724566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604250 (1 of 1) IPR002889//IPR003882//IPR013994 - Carbohydrate-binding WSC // Pistil-specific extensin-like protein // Carbohydrate-binding WSC, subgroup CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGGTGCGCCAGGCCGTGGTGGGCTTGGCGACGGGGGGCGTGGGCTTG
Internal bar code:TATCGATAAATATATGTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2074
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGTGATTGCCCACGTG
Suggested primer 2:AGCAGCAGCATGATCAGTGT