Insertion junction: CLIP2.008922_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008922
Chromosome:chromosome 3
Location:6378861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192550 RAD50 DNA repair protein; (1 of 1) K10866 - DNA repair protein RAD50 (RAD50) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGATTGTGGTCCCGGCCCCCTTCCACCCTTCCCAGTTCCCTGGACTAC
Internal bar code:GGGTGTTCTTCATTCAGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGAGCGTGACCTATGC
Suggested primer 2:TTTAACACGCAGCAGCACAC