Insertion junction: CLIP2.008924_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008924
Chromosome:chromosome 8
Location:2005576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g368600 (1 of 38) IPR000719//IPR002290//IPR011009 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCCCACCTCCCCCCGTGCACGCTTACGGAACTCACCCAGATGTCGT
Internal bar code:TCGCCGTTGAATCCCCCTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3667
LEAP-Seq percent confirming:88.785
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCGAATGCTGGAAGTA
Suggested primer 2:ATAGCGAGTTGGAAGGCCAC