Insertion junction: CLIP2.008925_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008925
Chromosome:chromosome 13
Location:2273800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTAGGGGCTTGCTTGCTTCCCGGGCAAATGTACGCACGGCGGGGCGC
Internal bar code:TCGTTTCGGCCTCTTTTCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGCAGCGTTATTAACCG
Suggested primer 2:AATCCCTCCCTCCCTCCTTC