Insertion junction: CLIP2.008931_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008931
Chromosome:chromosome 5
Location:300321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242858 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTATTGAGGGCCTTTACGGCTCGCTGACTGAACGACTTGACAGCAGC
Internal bar code:GGGACTCAGCCCCAGACGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1494
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGAGCAGCTCCGACAT
Suggested primer 2:TGATTCAGACGGTGGTGGTG