Insertion junction: CLIP2.008932_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008932
Chromosome:chromosome 10
Location:3383551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443801 (1 of 3) PF13401 - AAA domain (AAA_22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTTCTCCGCCGCAGCTCAGCCCCTCCGCCCAAACCCCAACCCTGCTC
Internal bar code:TATAGCGCGGTTGGCGACTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:10.3448
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCAGGGGAAATCAGT
Suggested primer 2:CTCGTAGATCGTTGGTCCGG