Insertion junction: CLIP2.008945_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008945
Chromosome:chromosome 8
Location:2107179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369600 MFT2,MAE2,MFT2 MATE efflux family protein; (1 of 1) IPR000104//IPR002528//IPR029303 - Antifreeze protein, type I // Multi antimicrobial extrusion protein // Polysaccharide biosynthesis protein, C-terminal domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCTGAGCGTCCCCAGCCGCCTCGGCGGCTGCAGCCGCCGCCGCCGCC
Internal bar code:CGCGATCGTGGTTACTGTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGTGGTGGTGTATGGTG
Suggested primer 2:GATGGTAGTGGTGGTGGTGG