Insertion junction: CLIP2.008947_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008947
Chromosome:chromosome 4
Location:1745575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212050 (1 of 2) IPR000104//IPR000253//IPR008984 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // SMAD/FHA domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTTCCTCCACCACGCACCGCAGGCCCTCCCCCGCCCTCACCCCACC
Internal bar code:GGTCTTTAATTTTACCGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:982
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAATTCGCCAAATCGTCC
Suggested primer 2:CCCGTTCCTGACAACTTCGA