Insertion junction: CLIP2.008950_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008950
Chromosome:chromosome 7
Location:1183448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321200 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTTCGACGCGCCCATCAACTTCGCTGCGGCCGACCTGTCCGAACTGC
Internal bar code:CTGTTAACGTGAAGGGGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCCTCGTTGGACTTGT
Suggested primer 2:GCAGTGATGGTGTACCTGCT