Insertion junction: CLIP2.008954_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008954
Chromosome:chromosome 3
Location:4737126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177550 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGATGCGCGTTCGCGCCGCCGCCGCCCGGGCCCACGCCGCTGCCCAGC
Internal bar code:CTTTGATCACTTATCCTGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1454
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCCTAGAACGTTCCTCT
Suggested primer 2:GATCCCAGCACATCCACACA