Insertion junction: CLIP2.008961_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008961
Chromosome:chromosome 6
Location:5550113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287000 (1 of 1) PTHR31495//PTHR31495:SF0 - FAMILY NOT NAMED // PEROXYGENASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCATACACTAAACCCCATCCCCCGCCCCGAACGTGACTACCCCAACT
Internal bar code:CTAGCCTGTATTGATCTTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTCTCAGGGACAACGAC
Suggested primer 2:CGGACACCCATACGCATACA