Insertion junction: CLIP2.008964_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008964
Chromosome:chromosome 10
Location:3301420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443100 (1 of 1) IPR001214//IPR023220 - SET domain // Type IV secretion system, VirB5-domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACGAAATGCAGGTCCCCCGCCGCTGACCCGTCCTCCACCGACGCATT
Internal bar code:TGTTTCTCAGGTGTGATGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3424
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGGCACACTAACAACC
Suggested primer 2:CAGCGGTGTGTTCAGAGAGT