Insertion junction: CLIP2.008966_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008966
Chromosome:chromosome 6
Location:6348449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCCTCGAAGGTCCGCGTGCTCGCAAAAGGCTCGGGGGAGCTGACGGC
Internal bar code:TTGCAGTTCGGGAGGGTAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1657
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGGTAGTCAGTGTCAC
Suggested primer 2:CTCTTGCTGCTGGGGATGAA