Insertion junction: CLIP2.008968_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008968
Chromosome:chromosome 12
Location:3607443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801394 (1 of 8) IPR001163//IPR010920 - LSM domain, eukaryotic/archaea-type // LSM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGACTGCCTCCACGTTCCAGGTCGCAGTGCTGCGCACGCCGCTGCTG
Internal bar code:GGGGGTGCCCCTAGAAGTCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1846
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCCTCCCACACACTTCC
Suggested primer 2:AGTCCACAGACATGGCCATG