Insertion junction: CLIP2.008968_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008968
Chromosome:chromosome 12
Location:3607468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801394 (1 of 8) IPR001163//IPR010920 - LSM domain, eukaryotic/archaea-type // LSM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATAATCACACACGCGTGTGTCCGTGCCGCGCCCTGCCCACACTCGGCG
Internal bar code:CGGGCCCCCTCCGGGCCTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1235
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCACAGACATGGCCATG
Suggested primer 2:CATCCCTCCCACACACTTCC