Insertion junction: CLIP2.008980_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008980
Chromosome:chromosome 6
Location:6774074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295950 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAGGAACCTTGCTAGGGGCCCAAGCTCCGGCGCCCCTAGCTACCCAA
Internal bar code:AGAAGTGTTTGAGGCCATATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1186
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTTGTAGCCGCAGTCTC
Suggested primer 2:CCCGTATGTGGGCCTCATAC