Insertion junction: CLIP2.008987_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008987
Chromosome:chromosome 8
Location:3064834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375450 SDR13 (1 of 1) 1.1.1.243 - Carveol dehydrogenase; Short-chain dehydrogenase/reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCCGAGATGTTGTGCCAGATGTTGACGAACGACTCCACGGTACCGTC
Internal bar code:TTAGGATCCTTGTGGTGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTTTGGCAACCGTGTAC
Suggested primer 2:TTGCAAGGACGTAGCGAAGT