Insertion junction: CLIP2.008988_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008988
Chromosome:chromosome 17
Location:389246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698600 LIPG3,LIP3 (1 of 2) IPR006693//IPR029058 - Partial AB-hydrolase lipase domain // Alpha/Beta hydrolase fold; Putative triacylglycerol lipase CDS
Cre17.g698650 GGT1,GTP1 Gamma-glutamyl transpeptidase; (1 of 1) 2.3.2.2//3.4.19.13 - Gamma-glutamyltransferase / Glutamyl transpeptidase // Glutathione hydrolase / Glutathionase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGAAAAGCGATTTCGGTTCGCCGCTCGCTTGCATGGCGCCACCTCC
Internal bar code:GGTAAATGTTGGTCCTCCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGGCGGTAGCTATAGG
Suggested primer 2:GCTCAGTTACAGCCACCCAT