Insertion junction: CLIP2.008989_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008989
Chromosome:chromosome 2
Location:6715382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387393 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGACCGCCTGCTGAGGCCCCAGGCCACGAGCAGCCGACTCGCTGCA
Internal bar code:TGTATCGAGGACACTTTACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1314
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGAGATAGCCTTCAACT
Suggested primer 2:TACGATGCCTATGGAACCGC