Insertion junction: CLIP2.008995_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008995
Chromosome:chromosome 1
Location:5727910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041050 AOC6 Cationic amino acid transporter; (1 of 2) K03294 - basic amino acid/polyamine antiporter, APA family (TC.APA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGATACCAGCTCAAACTGAACCGAACCCAATGCAACAGAGCGAAGGGG
Internal bar code:GTAGTAGTCTACAGGTTTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:281
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGGTGGTGTTCTTCTCC
Suggested primer 2:GCTCTTTTGCAGTGGGTTCG