Insertion junction: CLIP2.008997_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008997
Chromosome:chromosome 1
Location:7169544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051350 (1 of 3) PF13563 - 2'-5' RNA ligase superfamily (2_5_RNA_ligase2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGACCGGGCACGGCTGCTGCATCCCGCAGCGCTGGCCGCAGCCTGG
Internal bar code:TTCAACTTGTTATTTCGCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2463
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGTACGCTCCATAGCCG
Suggested primer 2:AACAAGCATGGGATACGGCA