Insertion junction: CLIP2.008997_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008997
Chromosome:chromosome 1
Location:7169569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051350 (1 of 3) PF13563 - 2'-5' RNA ligase superfamily (2_5_RNA_ligase2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGTAGCGCACAGTGAACGGTGACAGGTAGCCCTGCATTTATGAGGAT
Internal bar code:TTCAACTTGTTATTTCGCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2093
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGCATGGGATACGGCA
Suggested primer 2:ATTGGTACGCTCCATAGCCG