Insertion junction: CLIP2.008999_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008999
Chromosome:chromosome 2
Location:4327458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105026 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCTCCGCCGCCAACGTGATCCGTGTGCTCCTCCTGCTGAAGCTGATG
Internal bar code:GAACCCGCATCTGACGACTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCTTCTGTGTGCCAGCGA
Suggested primer 2:TACTGGCACAAATCGCGACT