Insertion junction: CLIP2.009010_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009010
Chromosome:chromosome 2
Location:4574576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107150 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCCCCACCCACCCATCCGTGCTCCCATCCACCTGCCCGTGCACCCAT
Internal bar code:TCAACTGGCTCTCCGGCACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3418
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:138
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:156

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTTTGCAGCAAAGTCG
Suggested primer 2:CAAGTGAGTTGGTGTGCACG