Insertion junction: CLIP2.009014_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009014
Chromosome:chromosome 3
Location:9175958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199759 GEX5,ORP3A (1 of 1) PTHR10972:SF96 - OXYSTEROL-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGAGCAGGGTTTGGGCCTACTTGTGTCTGACCACCGCATATGACGCGC
Internal bar code:GAACACACTTGATCAGGAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAGCTGGTACAACTGG
Suggested primer 2:CTAGGCATCGAAGGAGCAGG