Insertion junction: CLIP2.009014_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009014
Chromosome:chromosome 3
Location:9175969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199759 GEX5,ORP3A (1 of 1) PTHR10972:SF96 - OXYSTEROL-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGTGCACCCCTGTGACAACAGGAGCGCAAGCAAGCTTGGGGCACCA
Internal bar code:AGGATTCATTATAATTGGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGCATCGAAGGAGCAGG
Suggested primer 2:TGCAGAGCTGGTACAACTGG