Insertion junction: CLIP2.009019_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009019
Chromosome:chromosome 1
Location:4017496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026400 EXS1 (1 of 1) PF03124 - EXS family (EXS); ERD1 homolog intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGTCTTGTGGTGCTAGGCACTGTCTGTGTCTCTGTAGCAACACCTCG
Internal bar code:TATCCTGTAGCATGGCCTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1078
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCCATCACACACCGAAG
Suggested primer 2:CTTGGAGGGGGTTGCATGAT