Insertion junction: CLIP2.009021_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009021
Chromosome:chromosome 16
Location:5292985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683953 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGACAGCGGCGCCCAGACACAGCCCATGACGGAGCAGGTCACAGAA
Internal bar code:TAGACTTGCGCACCCGAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5423
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGATTCCCCCAAGTGCTG
Suggested primer 2:CTACTGCCAAGTCGTCAGCA