Insertion junction: CLIP2.009023_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009023
Chromosome:chromosome 1
Location:504941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003000 outside_mRNA
Cre01.g003050 SEC8 (1 of 1) PTHR14146:SF0 - EXOCYST COMPLEX COMPONENT 4; Component of the Exocyst Complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTATTGACCAGCGCCTCCTGCCGGTCCCTGAAGAGGGCGAACCTTGGC
Internal bar code:AGCGCTTCCGATTGAACCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:71.7949
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGCTGAAGGCCAAGG
Suggested primer 2:CGGTATTTGTGAGCCTGGGT