Insertion junction: CLIP2.009023_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009023
Chromosome:chromosome 1
Location:504943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003000 outside_mRNA
Cre01.g003050 SEC8 (1 of 1) PTHR14146:SF0 - EXOCYST COMPLEX COMPONENT 4; Component of the Exocyst Complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTATACACGGTTTACTGCGGGTCCCTCGGGCCCCGTGGACATGTGCGG
Internal bar code:CTGAGATCGCATACTGCGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATTTGTGAGCCTGGGT
Suggested primer 2:GAGGAGCTGAAGGCCAAGG