Insertion junction: CLIP2.009026_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009026
Chromosome:chromosome 2
Location:2175009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089450 HRP5 Hydroxyproline-rich glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCCGGCTCACCAGTTCTCGCTTTCCTTTTGAGAAACGCCGTGCTTAC
Internal bar code:TCTCCACGTAGCAGATCTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGCGAGGAGACATGTGC
Suggested primer 2:TCGAGTGCAAGCAAGTAGGG