Insertion junction: CLIP2.009028_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009028
Chromosome:chromosome 3
Location:628290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145527 RBL1 Rhomboid-like protease; (1 of 11) 3.4.21.105 - Rhomboid protease intron
lncRNA_TCONS_00147454 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCCCCGCGAGTCTGACTCTTTTCGCCTCCCTCCAACCGGCAGCGTGC
Internal bar code:GTCGCTCCATCTATAGGATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTCCCCACTGCTCTCTA
Suggested primer 2:TCCAGCACCGCACAATATGT