Insertion junction: CLIP2.009028_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009028
Chromosome:chromosome 3
Location:628290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145527 RBL1 Rhomboid-like protease; (1 of 11) 3.4.21.105 - Rhomboid protease intron
lncRNA_TCONS_00147454 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACGAAACCGCTTGCCAGTAGAAGCTGCTGCTTCCCGCGCTCGCGCGC
Internal bar code:TTGGTAATTAGCCCCAAAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2749
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGCACCGCACAATATGT
Suggested primer 2:ATGCTCCCCACTGCTCTCTA