Insertion junction: CLIP2.009032_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009032
Chromosome:chromosome 3
Location:3147170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164800 (1 of 1) PTHR24361:SF363 - PROTEIN KINASE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACTGTATGCAGCTGTAACGGCGCATTACGTCGCCCTGGCTGCGCACC
Internal bar code:CAGACTCAGATGAGTCTGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1079
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGAAGGTGTTGTAGGT
Suggested primer 2:ATCAGCGAGAGTGATGAGCG