Insertion junction: CLIP2.009032_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009032
Chromosome:chromosome 9
Location:5468196
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g408750 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGGGTGGGAGGAAGGGGCTGTAGATACCAGCCCAAACTGTACCAA
Internal bar code:ACATTCGCTACCTAGATCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCTACGAGACGAGAGC
Suggested primer 2:TCCGCTAGCCCTTTTGACTG