Insertion junction: CLIP2.009038_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009038
Chromosome:chromosome 3
Location:2046405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156000 (1 of 8) IPR014710 - RmlC-like jelly roll fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCACTGTATCCGTGGGCGTTCAGATGCTGCTGCGGGCACGCCATTTAG
Internal bar code:CAGAGAGGTGGGCTCATAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1633
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATCAACCCAGCCACCT
Suggested primer 2:GAGGTTACTGTCGTGGGTGG