Insertion junction: CLIP2.009041_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009041
Chromosome:chromosome 5
Location:2796754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241050 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCTTACAAGGACAGGAATGCACGTCGTGCTCACCACCTTGTAACCAC
Internal bar code:GGACATAGGCGCTGGGCCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2150
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGCGTTCAGGTTGATA
Suggested primer 2:CGCACTGCATGTCATGAAGG