Insertion junction: CLIP2.009041_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009041
Chromosome:chromosome 5
Location:2796755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241050 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGCATTGGTTTGCCGGCACAGCCTCGTTGCGGCACCTCGCCGCCGC
Internal bar code:TAGGCGTTTCTGGCTACTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:96.4912
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACTGCATGTCATGAAGG
Suggested primer 2:GGGTGGCGTTCAGGTTGATA