Insertion junction: CLIP2.009044_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009044
Chromosome:chromosome 3
Location:4585738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTCACTTTGTGGCTGCCCTTAGGCATATTCTGCCCTGTAGGGAAGG
Internal bar code:TGAGAAGTAACTCGGGGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1379
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGAACATGTTAGCGCG
Suggested primer 2:GATCGAGTACGCCAAGGAGG