Insertion junction: CLIP2.009050_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009050
Chromosome:chromosome 12
Location:3119809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500850 (1 of 85) IPR009057 - Homeodomain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCACCTCGGCTGCGCACGCCGGCCCCGACTCACACACACCCGACCTG
Internal bar code:CTGTCGTGTATAGGCAATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCGTACAATGCATCGC
Suggested primer 2:GCAACACAAGTGGTAGCAGC