Insertion junction: CLIP2.009056_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009056
Chromosome:chromosome 2
Location:5572394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115350 (1 of 2) 2.7.7.59 - [Protein-PII] uridylyltransferase / Uridylyl removing enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGACGCCCGTGGAAGACCACTGGCGGCCCCGGGCGCGGCGGCGGTGTC
Internal bar code:TAAGTATAGCTTGTTAAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGAAACGGTGTGGTGATA
Suggested primer 2:CTTGACCCAGCCTACCACTG