Insertion junction: CLIP2.009075_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009075
Chromosome:chromosome 10
Location:5506233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457950 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATGAAATGTGGCCCCGTGCCCCACGCGCCTTCGCACCTGCAGAGGC
Internal bar code:ATTAGTAGTGCACGTGTCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1539
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCATACTCGCACCTTGA
Suggested primer 2:ATGTGGAGGCGCTATGGATG