Insertion junction: CLIP2.009079_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009079
Chromosome:chromosome 12
Location:85396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00239098

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGTAGCTGGTTTGGGGCTTTCTGCTCACGGATGGGCGCCGGATGGGA
Internal bar code:CTTTATAGGCCCGGTCCTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGTCGGGGCTTTTTGG
Suggested primer 2:TGATGCCATCGGGATACGTG