Insertion junction: CLIP2.009079_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009079
Chromosome:chromosome 12
Location:85407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00239098

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTACTCATATTCCTAGACCGCAACTAGAGCGCAAGATTTAGTTGTAC
Internal bar code:CGGTCTTGTGGATGCGGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCCATCGGGATACGTG
Suggested primer 2:CATGTGTCGGGGCTTTTTGG