Insertion junction: CLIP2.009084_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009084
Chromosome:chromosome 3
Location:3336360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166000 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACGGCAAAGCCAGCAGGTCTGTCGCTGGAGCCTCGGCGAGCACGGAC
Internal bar code:GGTCATGTGCTAGGGATGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCATAGCGCATTTCCACACG
Suggested primer 2:TGGACAGGTCGTTCAGCTTC