Insertion junction: CLIP2.009085_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009085
Chromosome:chromosome 3
Location:4408080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175100 (1 of 1) IPR013750//IPR016035 - GHMP kinase, C-terminal domain // Acyl transferase/acyl hydrolase/lysophospholipase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGATGTCCCGATGTGCGCAACCCACACGCACCAGGTCATCAGCGGGC
Internal bar code:TAGTGTTAGGGGTACGCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:972
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCACGTTTGTCGGCTTT
Suggested primer 2:GATGATGATCGAGCCCTGCA