Insertion junction: CLIP2.009085_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009085
Chromosome:chromosome 3
Location:4408080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175100 (1 of 1) IPR013750//IPR016035 - GHMP kinase, C-terminal domain // Acyl transferase/acyl hydrolase/lysophospholipase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCGGATTAAGGCAGCCCGCACTCGCATGCACCCACGGGCGCGTGGGA
Internal bar code:TAGTGTTAGGGGTACGCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2996
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATGATCGAGCCCTGCA
Suggested primer 2:GCTTCACGTTTGTCGGCTTT