Insertion junction: CLIP2.009088_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009088
Chromosome:chromosome 13
Location:4042245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590650 (1 of 1) PF07223 - Protein of unknown function (DUF1421) (DUF1421) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGGCCCCAGCAAGCACTTCCTTCCCTGGCTCTCGGTTCAATTTGATT
Internal bar code:GTGCATGTAGGGGGATTTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:156
LEAP-Seq percent confirming:68.9655
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TACACGTGTTGCCGTACACA
Suggested primer 2:AAAGCCCTCCAACACCCAAA